3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF12106

Details:

PFam ID : PF12106

PFam Domain Description : Colicin C terminal ribonuclease domain

Number of Sequence in 50% Dataset : 5

Number of Sequence in Full Dataset : 17

Average sequence length: 32.5

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF12106	A6DCQ6_9PROT_165_200	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF12106	A5E7F0_LODEL_1_31	56

Sequence based PCA Plot of the family - PF12106 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay