3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF12052

Details:

PFam ID : PF12052

PFam Domain Description : Voltage gated calcium channel subunit beta domain 4Aa N terminal

Number of Sequence in 50% Dataset : 2

Number of Sequence in Full Dataset : 32

Average sequence length: 40.8

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF12052	B8PCW6_POSPM_225_605	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF12052	E5L9I0_BACOL_70_107	100

Sequence based PCA Plot of the family - PF12052 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay