3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF11926 Details: PFam ID : PF11926 PFam Domain Description : Domain of unknown function (DUF3444) Number of Sequence in 50% Dataset : 50 Number of Sequence in Full Dataset : 172 Average sequence length: 178.9 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF11926B9SW58_RICCO_462_50391.8 HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF11926D7SVH9_VITVI_262_479100 Sequence based PCA Plot of the family - PF11926 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 3 motifsMotif1 Start=13 Length=17Motif2 Start=1 Length=8Motif3 Start=42 Length=8 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF11926
PFam Domain Description : Domain of unknown function (DUF3444)
Number of Sequence in 50% Dataset : 50
Number of Sequence in Full Dataset : 172
Average sequence length: 178.9
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER