3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF11844

Details:

PFam ID : PF11844

PFam Domain Description : Domain of unknown function (DUF3364)

Number of Sequence in 50% Dataset : 4

Number of Sequence in Full Dataset : 119

Average sequence length: 55.2

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF11844	D8NI22_RALSO_1_66	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF11844	E4TG47_CALNY_8_53	95.7

Sequence based PCA Plot of the family - PF11844 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay