3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF11669

Details:

PFam ID : PF11669

PFam Domain Description : WW domain-binding protein 1

Number of Sequence in 50% Dataset : 22

Number of Sequence in Full Dataset : 41

Average sequence length: 85.1

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF11669	A7SPN1_NEMVE_1_53	76.1

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF11669	C3ZR55_BRAFL_31_173	95

Sequence based PCA Plot of the family - PF11669 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=8 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay