3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF11632

Details:

PFam ID : PF11632

PFam Domain Description : Lactococcin G-beta

Number of Sequence in 50% Dataset : 2

Number of Sequence in Full Dataset : 3

Average sequence length: 23.3

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF11632	E0TYE6_BACPZ_19_131	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF11632	Q9L9U5_ENTFA_25_59	100

Sequence based PCA Plot of the family - PF11632 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay