3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF11547 Details: PFam ID : PF11547 PFam Domain Description : E3 ubiquitin ligase EDD Number of Sequence in 50% Dataset : 2 Number of Sequence in Full Dataset : 15 Average sequence length: 49.5 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF11547Q8NZK7_STRP8_29_180No suitable BRS could be identified HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF11547A8XUC7_CAEBR_179_230100 Sequence based PCA Plot of the family - PF11547 : BRP of Green color is by FASSM and of Red color is by HMMER Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF11547
PFam Domain Description : E3 ubiquitin ligase EDD
Number of Sequence in 50% Dataset : 2
Number of Sequence in Full Dataset : 15
Average sequence length: 49.5
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER