3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF11502

Details:

PFam ID : PF11502

PFam Domain Description : B-cell lymphoma 9 protein

Number of Sequence in 50% Dataset : 2

Number of Sequence in Full Dataset : 26

Average sequence length: 38.6

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF11502	E0XIZ2_9NIDO_13_127	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF11502	D0Z7A0_DROVI_516_552	100

Sequence based PCA Plot of the family - PF11502 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay