3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF11423

Details:

PFam ID : PF11423

PFam Domain Description : Regulatory protein Mnt

Number of Sequence in 50% Dataset : 2

Number of Sequence in Full Dataset : 11

Average sequence length: 26.9

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF11423	A2DI90_TRIVA_154_337	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF11423	E9Z5X1_ESCFE_56_84	100

Sequence based PCA Plot of the family - PF11423 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay