3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF11098

Details:

PFam ID : PF11098

PFam Domain Description : Chlorosome envelope protein C

Number of Sequence in 50% Dataset : 3

Number of Sequence in Full Dataset : 12

Average sequence length: 127.1

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF11098	Q9XVD4_CAEEL_9_67	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF11098	Q3B679_PELLD_1_139	100

Sequence based PCA Plot of the family - PF11098 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay