3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF11095

Details:

PFam ID : PF11095

PFam Domain Description : Gem-associated protein 7 (Gemin7)

Number of Sequence in 50% Dataset : 12

Number of Sequence in Full Dataset : 27

Average sequence length: 73.8

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF11095	Q9XVD4_CAEEL_9_67	9.0

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF11095	A7S0B3_NEMVE_10_89	100

Sequence based PCA Plot of the family - PF11095 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay