3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF11057

Details:

PFam ID : PF11057

PFam Domain Description : Cortexin of kidney

Number of Sequence in 50% Dataset : 2

Number of Sequence in Full Dataset : 13

Average sequence length: 78.9

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF11057	C9DG03_9CAUD_47_182	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF11057	D2H740_AILME_1_66	100

Sequence based PCA Plot of the family - PF11057 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay