3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF11037

Details:

PFam ID : PF11037

PFam Domain Description : Insulin-resistance promoting peptide in skeletal muscle

Number of Sequence in 50% Dataset : 5

Number of Sequence in Full Dataset : 12

Average sequence length: 111.8

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF11037	A6ML41_CALJA_1_94	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF11037	E7F404_DANRE_1_134	100

Sequence based PCA Plot of the family - PF11037 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay