3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF11024

Details:

PFam ID : PF11024

PFam Domain Description : Dispersed gene family protein 1 of Trypanosoma cruzi region 4

Number of Sequence in 50% Dataset : 4

Number of Sequence in Full Dataset : 136

Average sequence length: 73.1

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF11024	A7ZBI1_CAMC1_1_111	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF11024	E7LBA2_TRYCR_1_47	97.7

Sequence based PCA Plot of the family - PF11024 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=24

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay