3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF10815

Details:

PFam ID : PF10815

PFam Domain Description : ComZ

Number of Sequence in 50% Dataset : 4

Number of Sequence in Full Dataset : 16

Average sequence length: 48.7

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10815	D5UPC3_TSUPD_18_144	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10815	A7GM66_BACCN_3_57	93.3

Sequence based PCA Plot of the family - PF10815 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay