3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF10791

Details:

PFam ID : PF10791

PFam Domain Description : Mitochondrial F1-F0 ATP synthase subunit F of fungi

Number of Sequence in 50% Dataset : 4

Number of Sequence in Full Dataset : 52

Average sequence length: 87.9

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10791	B6JWR5_SCHJY_2_88	66.6

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10791	B6JWR5_SCHJY_2_88	100

Sequence based PCA Plot of the family - PF10791 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=1 Length=27
Motif2 Start=31 Length=11

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay