3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF10786 Details: PFam ID : PF10786 PFam Domain Description : Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) Number of Sequence in 50% Dataset : 9 Number of Sequence in Full Dataset : 37 Average sequence length: 189 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF10786C4VUK3_9LACO_1_10912.5 HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF10786E3C9H1_9LACO_3_216100 Sequence based PCA Plot of the family - PF10786 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 4 motifsMotif1 Start=10 Length=11Motif2 Start=1 Length=8Motif3 Start=101 Length=8Motif4 Start=36 Length=14 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF10786
PFam Domain Description : Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
Number of Sequence in 50% Dataset : 9
Number of Sequence in Full Dataset : 37
Average sequence length: 189
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER