3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF10778

Details:

PFam ID : PF10778

PFam Domain Description : Halocarboxylic acid dehydrogenase DehI

Number of Sequence in 50% Dataset : 23

Number of Sequence in Full Dataset : 35

Average sequence length: 118.3

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10778	A0NYB0_9RHOB_337_434	50

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10778	Q8RKB2_9BURK_1_159	100

Sequence based PCA Plot of the family - PF10778 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay