3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF10705

Details:

PFam ID : PF10705

PFam Domain Description : Chloroplast protein precursor Ycf15 putative

Number of Sequence in 50% Dataset : 3

Number of Sequence in Full Dataset : 16

Average sequence length: 68

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10705	YCF15_CUSRE_1_58	100

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10705	YCF15_CUSRE_1_58	100

Sequence based PCA Plot of the family - PF10705 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay