3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF10642

Details:

PFam ID : PF10642

PFam Domain Description : Mitochondrial import receptor subunit or translocase

Number of Sequence in 50% Dataset : 9

Number of Sequence in Full Dataset : 36

Average sequence length: 46.1

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10642	E4ZGW3_LEPMC_40_86	75

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10642	E6ZL96_9BASI_1_49	100

Sequence based PCA Plot of the family - PF10642 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=39

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay