3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF10632

Details:

PFam ID : PF10632

PFam Domain Description : He_PIG associated, NEW1 domain of bacterial glycohydrolase

Number of Sequence in 50% Dataset : 2

Number of Sequence in Full Dataset : 24

Average sequence length: 27.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10632	D3YWX5_MOUSE_1_250	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10632	E4W1I9_BACFR_1_21	95.6

Sequence based PCA Plot of the family - PF10632 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay