3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF10585

Details:

PFam ID : PF10585

PFam Domain Description : Ubiquitin-activating enzyme active site

Number of Sequence in 50% Dataset : 12

Number of Sequence in Full Dataset : 322

Average sequence length: 45.3

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10585	A2D863_TRIVA_525_570	72.7

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10585	F0VNQ8_NEOCA_1006_1054	99.6

Sequence based PCA Plot of the family - PF10585 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=37

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay