3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF10576

Details:

PFam ID : PF10576

PFam Domain Description : Iron-sulfur binding domain of endonuclease III

Number of Sequence in 50% Dataset : 11

Number of Sequence in Full Dataset : 783

Average sequence length: 17.0

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10576	E3PXQ6_CLOSD_185_201	70

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10576	Q9CBJ0_MYCLE_197_212	92.7

Sequence based PCA Plot of the family - PF10576 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=5 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay