3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF10524

Details:

PFam ID : PF10524

PFam Domain Description : Nuclear factor I protein pre-N-terminus

Number of Sequence in 50% Dataset : 3

Number of Sequence in Full Dataset : 28

Average sequence length: 40.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10524	Q3I8W1_MONPV_8_64	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10524	Q8I8W8_BRUMA_1_37	100

Sequence based PCA Plot of the family - PF10524 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay