3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF10522

Details:

PFam ID : PF10522

PFam Domain Description : RII binding domain

Number of Sequence in 50% Dataset : 12

Number of Sequence in Full Dataset : 13

Average sequence length: 16.6

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10522	E9H5F2_DAPPU_46_309	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10522	AKA12_HUMAN_1541_1558	33

Sequence based PCA Plot of the family - PF10522 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay