3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF10481

Details:

PFam ID : PF10481

PFam Domain Description : Cenp-F N-terminal domain

Number of Sequence in 50% Dataset : 10

Number of Sequence in Full Dataset : 17

Average sequence length: 182.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10481	C3Y0D1_BRAFL_1_130	66.6

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10481	C3Y0D1_BRAFL_1_130	100

Sequence based PCA Plot of the family - PF10481 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay