3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF10432

Details:

PFam ID : PF10432

PFam Domain Description : Bacterial phospho-glucose isomerase C-terminal region

Number of Sequence in 50% Dataset : 46

Number of Sequence in Full Dataset : 116

Average sequence length: 153

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10432	F2LB72_BURGA_208_349	77.7

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10432	A0LS31_ACIC1_206_379	100

Sequence based PCA Plot of the family - PF10432 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=14 Length=11
Motif2 Start=166 Length=8
Motif3 Start=5 Length=8
Motif4 Start=146 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay