3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF10418

Details:

PFam ID : PF10418

PFam Domain Description : Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B

Number of Sequence in 50% Dataset : 6

Number of Sequence in Full Dataset : 790

Average sequence length: 38.2

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10418	D4RFY9_ENTFC_215_241	100

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10418	D4RFY9_ENTFC_215_241	100

Sequence based PCA Plot of the family - PF10418 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=1 Length=17
Motif2 Start=22 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay