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3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF10359
Details:

PFam ID : PF10359

PFam Domain Description : Ribosomal RNA methyltransferase (FmrO)

Number of Sequence in 50% Dataset : 51

Number of Sequence in Full Dataset : 87

Average sequence length: 428.2

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF10359A8PQY8_MALGO_1475_201688
HMMER Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF10359Q6C404_YARLI_1704_2196100
Sequence based PCA Plot of the family - PF10359 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=96 Length=8
Motif2 Start=344 Length=14
Motif3 Start=470 Length=8
Motif4 Start=12 Length=8
Download PSSM/HMM Models/Alignment:
Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay