3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF10313

Details:

PFam ID : PF10313

PFam Domain Description : Uncharacterised protein domain (DUF2415)

Number of Sequence in 50% Dataset : 4

Number of Sequence in Full Dataset : 57

Average sequence length: 40.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10313	E1ZBA7_9CHLO_181_219	66.6

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10313	E4ZIC4_LEPMC_334_371	100

Sequence based PCA Plot of the family - PF10313 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay