3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF10264

Details:

PFam ID : PF10264

PFam Domain Description : Winged helix Storkhead-box1 domain

Number of Sequence in 50% Dataset : 12

Number of Sequence in Full Dataset : 29

Average sequence length: 72.5

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10264	A8PYW3_BRUMA_99_178	18.1

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10264	C4QBX8_SCHMA_14_94	100

Sequence based PCA Plot of the family - PF10264 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay