3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF10261

Details:

PFam ID : PF10261

PFam Domain Description : Inositol phospholipid synthesis and fat-storage-inducing TM

Number of Sequence in 50% Dataset : 63

Number of Sequence in Full Dataset : 130

Average sequence length: 210.8

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10261	E3KPD6_PUCGT_93_350	98.3

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10261	E3KPD6_PUCGT_93_350	100

Sequence based PCA Plot of the family - PF10261 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=22 Length=8
Motif2 Start=13 Length=8
Motif3 Start=103 Length=11
Motif4 Start=231 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay