3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF10230 Details: PFam ID : PF10230 PFam Domain Description : Uncharacterised conserved protein (DUF2305) Number of Sequence in 50% Dataset : 89 Number of Sequence in Full Dataset : 163 Average sequence length: 239.1 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF10230D2UX50_NAEGR_116_41692.0 HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF10230Q2GX87_CHAGB_32_362100 Sequence based PCA Plot of the family - PF10230 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 3 motifsMotif1 Start=40 Length=8Motif2 Start=22 Length=17Motif3 Start=1 Length=8 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF10230
PFam Domain Description : Uncharacterised conserved protein (DUF2305)
Number of Sequence in 50% Dataset : 89
Number of Sequence in Full Dataset : 163
Average sequence length: 239.1
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER