3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF10223

Details:

PFam ID : PF10223

PFam Domain Description : Uncharacterized conserved protein (DUF2181)

Number of Sequence in 50% Dataset : 31

Number of Sequence in Full Dataset : 74

Average sequence length: 218.7

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10223	C4WRR9_ACYPI_26_136	76.6

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10223	D0MS66_PHYIT_3_268	100

Sequence based PCA Plot of the family - PF10223 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=163 Length=8
Motif2 Start=7 Length=8
Motif3 Start=132 Length=8
Motif4 Start=97 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay