3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF10217

Details:

PFam ID : PF10217

PFam Domain Description : Uncharacterized conserved protein (DUF2039)

Number of Sequence in 50% Dataset : 8

Number of Sequence in Full Dataset : 58

Average sequence length: 89.9

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10217	B6UDG8_MAIZE_7_65	28.5

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10217	Q014W1_OSTTA_850_948	100

Sequence based PCA Plot of the family - PF10217 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=42

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay