3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF10203

Details:

PFam ID : PF10203

PFam Domain Description : Cytochrome c oxidase assembly protein PET191

Number of Sequence in 50% Dataset : 22

Number of Sequence in Full Dataset : 100

Average sequence length: 64.0

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10203	B4MTU9_DROWI_12_90	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10203	Q8IB89_PLAF7_13_81	100

Sequence based PCA Plot of the family - PF10203 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=1 Length=8
Motif2 Start=14 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay