3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF10198

Details:

PFam ID : PF10198

PFam Domain Description : Histone acetyltransferases subunit 3

Number of Sequence in 50% Dataset : 29

Number of Sequence in Full Dataset : 94

Average sequence length: 131.6

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10198	E7A1K4_9BASI_716_871	3.5

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10198	E7A1K4_9BASI_716_871	98.9

Sequence based PCA Plot of the family - PF10198 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=8 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay