3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF10191

Details:

PFam ID : PF10191

PFam Domain Description : Golgi complex component 7 (COG7)

Number of Sequence in 50% Dataset : 78

Number of Sequence in Full Dataset : 108

Average sequence length: 424.8

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10191	D8Q8Y0_SCHCM_11_360	90.9

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10191	D0P432_PHYIT_9_727	100

Sequence based PCA Plot of the family - PF10191 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=10 Length=8
Motif2 Start=1 Length=8
Motif3 Start=83 Length=8
Motif4 Start=135 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay