3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF10181

Details:

PFam ID : PF10181

PFam Domain Description : GPI-GlcNAc transferase complex, PIG-H component

Number of Sequence in 50% Dataset : 42

Number of Sequence in Full Dataset : 102

Average sequence length: 68.9

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10181	A8PW31_MALGO_319_400	60.9

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10181	A8PW31_MALGO_319_400	100

Sequence based PCA Plot of the family - PF10181 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 3 motifs

Motif1 Start=51 Length=8
Motif2 Start=4 Length=18
Motif3 Start=39 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay