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3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF10177
Details:

PFam ID : PF10177

PFam Domain Description : Uncharacterised conserved protein (DUF2371)

Number of Sequence in 50% Dataset : 15

Number of Sequence in Full Dataset : 34

Average sequence length: 119.5

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF10177C3XRN4_BRAFL_58_18785.7
HMMER Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF10177Q4SC31_TETNG_129_310100
Sequence based PCA Plot of the family - PF10177 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=19 Length=8
Motif2 Start=10 Length=8
Motif3 Start=1 Length=8
Motif4 Start=98 Length=8
Download PSSM/HMM Models/Alignment:
Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay