3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF10159

Details:

PFam ID : PF10159

PFam Domain Description : Kinase phosphorylation protein

Number of Sequence in 50% Dataset : 11

Number of Sequence in Full Dataset : 82

Average sequence length: 77.1

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10159	A8J1S5_CHLRE_12_99	90

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10159	B6AEW0_CRYMR_14_110	100

Sequence based PCA Plot of the family - PF10159 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=36 Length=8
Motif2 Start=27 Length=8
Motif3 Start=18 Length=8
Motif4 Start=9 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay