3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF10073

Details:

PFam ID : PF10073

PFam Domain Description : Uncharacterized protein conserved in bacteria (DUF2312)

Number of Sequence in 50% Dataset : 13

Number of Sequence in Full Dataset : 134

Average sequence length: 71.8

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10073	B4W6T8_9CAUL_1_74	8.3

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10073	B4W6T8_9CAUL_1_74	100

Sequence based PCA Plot of the family - PF10073 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=4 Length=42

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay