3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF10055

Details:

PFam ID : PF10055

PFam Domain Description : Uncharacterized small protein (DUF2292)

Number of Sequence in 50% Dataset : 10

Number of Sequence in Full Dataset : 82

Average sequence length: 36.9

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10055	A5MUF7_STRPN_36_67	11.1

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10055	B0TEQ3_HELMI_19_56	100

Sequence based PCA Plot of the family - PF10055 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=28

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay