3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF10008 Details: PFam ID : PF10008 PFam Domain Description : Uncharacterized protein conserved in bacteria (DUF2251) Number of Sequence in 50% Dataset : 7 Number of Sequence in Full Dataset : 25 Average sequence length: 92.7 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF10008B5IDM2_ACIB4_1_58No suitable BRS could be identified HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF10008E8V2Y4_TERSS_13_123100 Sequence based PCA Plot of the family - PF10008 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 2 motifsMotif1 Start=10 Length=28Motif2 Start=1 Length=8 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF10008
PFam Domain Description : Uncharacterized protein conserved in bacteria (DUF2251)
Number of Sequence in 50% Dataset : 7
Number of Sequence in Full Dataset : 25
Average sequence length: 92.7
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER