3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09989

Details:

PFam ID : PF09989

PFam Domain Description : CoA enzyme activase uncharacterised domain (DUF2229)

Number of Sequence in 50% Dataset : 79

Number of Sequence in Full Dataset : 380

Average sequence length: 202.3

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09989	Q24V56_DESHY_2_250	97.4

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09989	Q24V56_DESHY_2_250	100

Sequence based PCA Plot of the family - PF09989 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=14 Length=8
Motif2 Start=1 Length=11
Motif3 Start=50 Length=11
Motif4 Start=190 Length=11

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay