3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09974

Details:

PFam ID : PF09974

PFam Domain Description : Uncharacterized protein conserved in archaea (DUF2209)

Number of Sequence in 50% Dataset : 6

Number of Sequence in Full Dataset : 15

Average sequence length: 115.6

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09974	D5VTX8_METIM_4_127	100

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09974	Q8TY51_METKA_4_132	100

Sequence based PCA Plot of the family - PF09974 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=2 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay