3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09963

Details:

PFam ID : PF09963

PFam Domain Description : Uncharacterized protein conserved in bacteria (DUF2197)

Number of Sequence in 50% Dataset : 7

Number of Sequence in Full Dataset : 48

Average sequence length: 53.6

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09963	B1HRY1_LYSSC_3_51	100

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09963	B0TBB8_HELMI_1_54	100

Sequence based PCA Plot of the family - PF09963 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=39

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay