3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09920

Details:

PFam ID : PF09920

PFam Domain Description : Uncharacterized protein conserved in archaea (DUF2150)

Number of Sequence in 50% Dataset : 7

Number of Sequence in Full Dataset : 32

Average sequence length: 181.7

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09920	Q0W305_UNCMA_2_194	33.3

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09920	Q0W305_UNCMA_2_194	100

Sequence based PCA Plot of the family - PF09920 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=2 Length=39

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay