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3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09903
Details:

PFam ID : PF09903

PFam Domain Description : Uncharacterized protein conserved in bacteria (DUF2130)

Number of Sequence in 50% Dataset : 32

Number of Sequence in Full Dataset : 137

Average sequence length: 249.8

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF09903E8L9N3_9RHIZ_316_56364.5
HMMER Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF09903Y161_MYCPN_156_44498.5
Sequence based PCA Plot of the family - PF09903 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=28 Length=8
Motif2 Start=19 Length=8
Motif3 Start=10 Length=8
Motif4 Start=1 Length=8
Download PSSM/HMM Models/Alignment:
Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay