3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09891

Details:

PFam ID : PF09891

PFam Domain Description : Uncharacterized protein conserved in archaea (DUF2118)

Number of Sequence in 50% Dataset : 14

Number of Sequence in Full Dataset : 28

Average sequence length: 143.3

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09891	D7DAD3_STAHD_4_159	76.9

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09891	D7DAD3_STAHD_4_159	100

Sequence based PCA Plot of the family - PF09891 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay